BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B08LP1|AL430004
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig919 1530 0.0
3x_Contig1257 379 e-105
>3x_Contig919
Length = 4576
Score = 1530 bits (772), Expect = 0.0
Identities = 800/808 (99%), Gaps = 2/808 (0%)
Strand = Plus / Minus
Query: 166 tgagaagagcaagacgaaaagataacaaaccccagcaacaacgagaacattctcgtgaca 225
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 4566 tgagaagagcaagacgaaaagatancaacnnccagcaacaacgagaacattctcgtgaca 4507
Query: 226 ataacaaagtggaagcagaatatgatgttgaaagaggttacagctctagatctgcatcta 285
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 4506 ataacaaagtggaagcagaatatgatgt-gaaagaggtancagctctagatctgcatcta 4448
Query: 286 gatctcaatctttttcagcttccacatcaggttccatgtctggcagctcgggtcccaaat 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4447 gatctcaatctttttcagcttccacatcaggttccatgtctggcagctcgggtcccaaat 4388
Query: 346 caatacgaaagactatcgattctgaattgaaaatccaattccaatatagcattctaccta 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4387 caatacgaaagactatcgattctgaattgaaaatccaattccaatatagcattctaccta 4328
Query: 406 aggggaatgatacttatagaagcagatcgttgctttttacaaatgttaattctgagctag 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4327 aggggaatgatacttatagaagcagatcgttgctttttacaaatgttaattctgagctag 4268
Query: 466 atattgtcgagttcttacaaaaagttgcaaaaaattacccaatagaaagcatttacttga 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4267 atattgtcgagttcttacaaaaagttgcaaaaaattacccaatagaaagcatttacttga 4208
Query: 526 tcaaagatgaggacaccggcgatgacattgaaaaccttaatactagtaataatgatgatg 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4207 tcaaagatgaggacaccggcgatgacattgaaaaccttaatactagtaataatgatgatg 4148
Query: 586 atcctaatcaaaattataatgctgataataataacaatagcaagagagaggatgataagg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4147 atcctaatcaaaattataatgctgataataataacaatagcaagagagaggatgataagg 4088
Query: 646 ataaggaatcagcccctgctttaaccaaacagattgccatttctccgtcaagttgttcac 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4087 ataaggaatcagcccctgctttaaccaaacagattgccatttctccgtcaagttgttcac 4028
Query: 706 aacagtcatatcttttaagtttcttcacaaaagaatcatgcctagatttctacaataatt 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4027 aacagtcatatcttttaagtttcttcacaaaagaatcatgcctagatttctacaataatt 3968
Query: 766 tattacagagatatgctgaaatcaaaaacgcagtaaagtctgaccagttagcaatgaact 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3967 tattacagagatatgctgaaatcaaaaacgcagtaaagtctgaccagttagcaatgaact 3908
Query: 826 tcgttaagattcaagacgatgaggaatggatggccaacttgaagatgaacgttatttctt 885
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3907 tcgttaagattcaagacgatgaggaatggatggccaacttgaagatgaacgttatttc-t 3849
Query: 886 ttgggtgccactagaagcctttatgtcgagtttgcggacgatagcgttacttcagacact 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3848 ttgggtgccactagaagcctttatgtcgagtttgcggacgatagcgttacttcagacact 3789
Query: 946 atttgggacacactcccgtttttgaaga 973
||||||||||||||||||||||||||||
Sbjct: 3788 atttgggacacactcccgtttttgaaga 3761
>3x_Contig1257
Length = 4889
Score = 379 bits (191), Expect = e-105
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 1 gatcgccgtttgtaaacactccacaaactggtggacctatgtctgctggtactggagcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4699 gatcgccgtttgtaaacactccacaaactggtggacctatgtctgctggtactggagcga 4758
Query: 61 atggtgtcccagtaggatctaataacataatgaatttgcgtaattcaagctataaatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4759 atggtgtcccagtaggatctaataacataatgaatttgcgtaattcaagctataaatcat 4818
Query: 121 tctacccaccggcaccgaaattgaggccagcaccatctggtagattgagaagagcaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4819 tctacccaccggcaccgaaattgaggccagcaccatctggtagattgagaagagcaagac 4878
Query: 181 gaaaagataac 191
|||||||||||
Sbjct: 4879 gaaaagataac 4889
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8203
Number of Sequences: 1807
Number of extensions: 8203
Number of successful extensions: 82
Number of sequences better than 1.0e-20: 2
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)